Polymer Genomics

Multi-layer reference-genome data and analysis infrastructure — from base-pair biophysics to whole-genome structure. Built to support construct design, and open to use on its own.

Genome Viewer

Browse any locus with material-channel biophysics — stacking energy, curvature, CpG density, and isochore class.

hg38 · hg37

Digital Karyotype

The whole genome at a glance — every chromosome banded by isochore class, then drill into any arm or gene.

24 chromosomes

More genomic tools

EvaluatePhysics linter for any DNA sequence — thermodynamic profile, CpG islands, structural flags, batch mode.

13 flags

MethylationDMP volcano and Manhattan plots, TE/ERV family scoring, reactivation risk, Retro-Age clock.

937K probes

TE methylationTE-resolved CpG context — family-level methylation across the repeat landscape.

800K CpGs

Epigenetic clocksProbe anatomy, cross-clock comparison, coefficient application.

6 clocks

TransposomeTransposable elements with TE age, awakening potential, EPIC v2 probe overlap.

5.6M TEs

HLAAllele biophysics for transplant loci — non-coding divergence, expression mismatch scoring.

6 loci

Claims UniverseA live topology of machine-verifiable claims — status-colored nodes, each licensed by evidence.

live corpus

API & MCPREST endpoints and Model Context Protocol for agents — reference plus compute, evidence-class metadata.

70 tools

DevelopersQuickstart, code examples, try-it evaluator, data inventory. Python SDK on PyPI.

pip install

Every layer is published with its provenance, license, evidence class, and version pin — see data sources.